STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC60_05801Protein Dom3Z. (367 aa)    
Predicted Functional Partners:
ALC60_10439
5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.
   
 
 0.994
ALC60_06012
Exosome complex exonuclease RRP42.
   
   0.953
ALC60_02239
Fas-binding factor 1.
    
 
 0.943
ALC60_01332
Regulation of nuclear pre-mRNA domain-containing protein 1B.
    
 
 0.943
ALC60_14126
Regulation of nuclear pre-mRNA domain-containing protein 2.
    
 
 0.819
ALC60_01334
CCDC66 domain-containing protein.
    
 
 0.819
ALC60_04253
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
    
   0.756
ALC60_10087
Armadillo repeat-containing protein 5.
    
   0.742
ALC60_08772
Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2.
   
   0.716
ALC60_12398
Polynucleotide 5'-hydroxyl-kinase NOL9.
   
 
 0.699
Your Current Organism:
Trachymyrmex zeteki
NCBI taxonomy Id: 64791
Other names: T. zeteki
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