STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC60_02274Zinc finger matrin-type protein 5. (166 aa)    
Predicted Functional Partners:
ALC60_14825
Small nuclear ribonucleoprotein Sm D2.
   
 0.988
ALC60_11131
Uncharacterized protein.
   
 0.987
ALC60_06802
Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.987
ALC60_03326
Small nuclear ribonucleoprotein Sm D3.
   
 0.986
ALC60_10689
Small nuclear ribonucleoprotein G.
   
 0.983
ALC60_08679
Splicing factor 3B subunit 1.
   
 0.980
ALC60_11714
RNA-binding protein 40.
   
 0.976
ALC60_03931
Splicing factor 3B subunit 4.
   
 0.976
ALC60_10986
Splicing factor 3B subunit 2.
   
 0.972
ALC60_13203
Splicing factor 3B subunit 3.
   
 0.968
Your Current Organism:
Trachymyrmex zeteki
NCBI taxonomy Id: 64791
Other names: T. zeteki
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.