STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC60_02103G2/M phase-specific E3 ubiquitin-protein ligase. (1384 aa)    
Predicted Functional Partners:
ALC60_09254
Retinoblastoma-binding protein 5.
    
 0.916
ALC60_13381
Set1/Ash2 histone methyltransferase complex subunit ASH2.
    
 0.913
ALC60_10489
CREB-binding protein.
   
 0.882
ALC60_12071
Polycomb protein eed-A.
   
 0.810
ALC60_02846
Polycomb protein Suz12.
   
 0.796
ALC60_02422
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.793
ALC60_07080
Lysine-specific demethylase 6A.
   
 0.783
ALC60_03624
Putative histone-binding protein Caf1.
   
 0.761
ALC60_02466
Hepatoma-derived growth factor.
    
 
 0.760
ALC60_08877
Histone H2B; Belongs to the histone H2B family.
    
 0.759
Your Current Organism:
Trachymyrmex zeteki
NCBI taxonomy Id: 64791
Other names: T. zeteki
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.