STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC60_016762',5'-phosphodiesterase 12. (567 aa)    
Predicted Functional Partners:
ALC60_00945
CCR4-NOT transcription complex subunit 1.
   
 0.933
ALC60_13863
Cell differentiation protein RCD1 like protein.
    
 0.931
ALC60_06438
CCR4-NOT transcription complex subunit 7.
    
 0.931
ALC60_13701
CCR4-NOT transcription complex subunit 4.
    
 0.930
ALC60_00839
CCR4-NOT transcription complex subunit 3.
    
 0.926
ALC60_04528
CCR4-NOT transcription complex subunit 2.
    
 0.925
ALC60_11051
Putative ATP-dependent RNA helicase me31b; Belongs to the DEAD box helicase family.
    
 0.848
ALC60_11303
UPF0760 protein C2orf29 like protein.
    
 0.816
ALC60_04284
CCR4-NOT transcription complex subunit 10-B.
    
 0.800
ALC60_01346
Parafibromin.
   
 
 0.800
Your Current Organism:
Trachymyrmex zeteki
NCBI taxonomy Id: 64791
Other names: T. zeteki
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.