STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC60_01160Putative E3 ubiquitin-protein ligase sinah. (515 aa)    
Predicted Functional Partners:
ALC60_10717
Ubiquitin-60S ribosomal protein L40.
    
 0.948
ALC60_03302
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.919
ALC60_02781
Calcyclin-binding protein.
    
 0.903
ALC60_00538
Partitioning defective 6 like protein gamma.
    
 0.848
ALC60_13138
Ubiquitin-conjugating enzyme E2 5A.
   
 0.831
ALC60_08416
Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.831
ALC60_03145
Ubiquitin-conjugating enzyme E2-17 kDa; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.831
ALC60_00292
Ubiquitin-conjugating enzyme E2-24 kDa; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.831
ALC60_07868
Peripheral plasma membrane protein CASK.
    
 0.812
ALC60_07873
Peripheral plasma membrane protein CASK.
    
 0.812
Your Current Organism:
Trachymyrmex zeteki
NCBI taxonomy Id: 64791
Other names: T. zeteki
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.