STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC60_01366Uncharacterized protein. (1253 aa)    
Predicted Functional Partners:
ALC60_13683
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.932
ALC60_12676
Transcription elongation factor SPT5.
   
 0.931
ALC60_09989
DNA-directed RNA polymerases I, II, and III subunit RPABC5.
    
 0.926
ALC60_09404
DNA-directed RNA polymerases I, II, and III subunit RPABC3.
    
 0.926
ALC60_07193
DNA-directed RNA polymerase II subunit RPB11.
    
 0.926
ALC60_04522
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
    
 0.926
ALC60_02740
DNA-directed RNA polymerase II subunit RPB3.
    
 0.926
ALC60_00721
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
    
 0.926
ALC60_03534
Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.
    
 0.922
ALC60_05824
RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II.
    
 0.921
Your Current Organism:
Trachymyrmex zeteki
NCBI taxonomy Id: 64791
Other names: T. zeteki
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.