Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALC60_00504 | ALC60_01460 | A0A151XJK2 | A0A151XGN0 | Diphthine synthase. | Elongation factor Tu GTP-binding domain-containing protein 1. | 0.854 |
ALC60_00504 | ALC60_01932 | A0A151XJK2 | A0A151XFG0 | Diphthine synthase. | RNA 3'-terminal phosphate cyclase. | 0.701 |
ALC60_00504 | ALC60_02468 | A0A151XJK2 | A0A151XEV5 | Diphthine synthase. | Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. | 0.854 |
ALC60_00504 | ALC60_05293 | A0A151XJK2 | A0A151X620 | Diphthine synthase. | Amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.636 |
ALC60_00504 | ALC60_10406 | A0A151XJK2 | A0A151WRL3 | Diphthine synthase. | Putative oxidoreductase yrbE. | 0.642 |
ALC60_00504 | ALC60_10573 | A0A151XJK2 | A0A151WQZ0 | Diphthine synthase. | Diphthamide biosynthesis protein 1. | 0.957 |
ALC60_00504 | ALC60_10604 | A0A151XJK2 | A0A151WR61 | Diphthine synthase. | Elongation factor 2. | 0.973 |
ALC60_00504 | ALC60_10776 | A0A151XJK2 | A0A151WQR1 | Diphthine synthase. | Tr-type G domain-containing protein. | 0.854 |
ALC60_00504 | ALC60_11366 | A0A151XJK2 | A0A151WP56 | Diphthine synthase. | 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2. | 0.957 |
ALC60_00504 | ALC60_12276 | A0A151XJK2 | A0A151WLS3 | Diphthine synthase. | GMP synthase [glutamine-hydrolyzing]. | 0.708 |
ALC60_01460 | ALC60_00504 | A0A151XGN0 | A0A151XJK2 | Elongation factor Tu GTP-binding domain-containing protein 1. | Diphthine synthase. | 0.854 |
ALC60_01460 | ALC60_05293 | A0A151XGN0 | A0A151X620 | Elongation factor Tu GTP-binding domain-containing protein 1. | Amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.420 |
ALC60_01460 | ALC60_10573 | A0A151XGN0 | A0A151WQZ0 | Elongation factor Tu GTP-binding domain-containing protein 1. | Diphthamide biosynthesis protein 1. | 0.920 |
ALC60_01460 | ALC60_11366 | A0A151XGN0 | A0A151WP56 | Elongation factor Tu GTP-binding domain-containing protein 1. | 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2. | 0.920 |
ALC60_01460 | ALC60_12276 | A0A151XGN0 | A0A151WLS3 | Elongation factor Tu GTP-binding domain-containing protein 1. | GMP synthase [glutamine-hydrolyzing]. | 0.496 |
ALC60_01932 | ALC60_00504 | A0A151XFG0 | A0A151XJK2 | RNA 3'-terminal phosphate cyclase. | Diphthine synthase. | 0.701 |
ALC60_01932 | ALC60_10406 | A0A151XFG0 | A0A151WRL3 | RNA 3'-terminal phosphate cyclase. | Putative oxidoreductase yrbE. | 0.898 |
ALC60_02468 | ALC60_00504 | A0A151XEV5 | A0A151XJK2 | Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. | Diphthine synthase. | 0.854 |
ALC60_02468 | ALC60_05293 | A0A151XEV5 | A0A151X620 | Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. | Amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.420 |
ALC60_02468 | ALC60_10573 | A0A151XEV5 | A0A151WQZ0 | Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. | Diphthamide biosynthesis protein 1. | 0.920 |
page 1 of 3