STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC60_04639Uncharacterized protein. (126 aa)    
Predicted Functional Partners:
ALC60_05105
Cyclin-G-associated kinase.
    
 0.949
ALC60_05837
Sorting nexin; Involved in several stages of intracellular trafficking.
   
 0.946
ALC60_10036
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
   
 
 0.895
ALC60_00156
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.895
ALC60_01649
Cation-independent mannose-6-phosphate receptor.
    
 0.814
ALC60_06918
Sortilin-related receptor.
    
 0.768
ALC60_12034
Sorting nexin-33.
   
 0.760
ALC60_07702
Synaptobrevin.
    
 0.743
ALC60_07701
Synaptobrevin.
    
 0.743
ALC60_02900
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.736
Your Current Organism:
Trachymyrmex zeteki
NCBI taxonomy Id: 64791
Other names: T. zeteki
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.