Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Rvan_0075 | Rvan_0076 | KEGG: pla:Plav_3269 hypothetical protein. | PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: mno:Mnod_6052 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen. | 0.554 |
Rvan_0075 | Rvan_0077 | KEGG: pla:Plav_3269 hypothetical protein. | PFAM: protein of unknown function DUF583; KEGG: pla:Plav_3273 hypothetical protein. | 0.483 |
Rvan_0075 | Rvan_0872 | KEGG: pla:Plav_3269 hypothetical protein. | PFAM: phosphopantetheine-binding; KEGG: rru:Rru_A0044 acyl carrier protein. | 0.512 |
Rvan_0075 | Rvan_1306 | KEGG: pla:Plav_3269 hypothetical protein. | KEGG: pla:Plav_3330 hypothetical protein. | 0.704 |
Rvan_0076 | Rvan_0075 | PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: mno:Mnod_6052 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen. | KEGG: pla:Plav_3269 hypothetical protein. | 0.554 |
Rvan_0076 | Rvan_0077 | PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: mno:Mnod_6052 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen. | PFAM: protein of unknown function DUF583; KEGG: pla:Plav_3273 hypothetical protein. | 0.524 |
Rvan_0077 | Rvan_0075 | PFAM: protein of unknown function DUF583; KEGG: pla:Plav_3273 hypothetical protein. | KEGG: pla:Plav_3269 hypothetical protein. | 0.483 |
Rvan_0077 | Rvan_0076 | PFAM: protein of unknown function DUF583; KEGG: pla:Plav_3273 hypothetical protein. | PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: mno:Mnod_6052 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen. | 0.524 |
Rvan_0077 | Rvan_0621 | PFAM: protein of unknown function DUF583; KEGG: pla:Plav_3273 hypothetical protein. | KEGG: azl:AZL_009640 thiamine-phosphate pyrophosphorylase. | 0.481 |
Rvan_0077 | Rvan_0872 | PFAM: protein of unknown function DUF583; KEGG: pla:Plav_3273 hypothetical protein. | PFAM: phosphopantetheine-binding; KEGG: rru:Rru_A0044 acyl carrier protein. | 0.446 |
Rvan_0077 | Rvan_1306 | PFAM: protein of unknown function DUF583; KEGG: pla:Plav_3273 hypothetical protein. | KEGG: pla:Plav_3330 hypothetical protein. | 0.476 |
Rvan_0621 | Rvan_0077 | KEGG: azl:AZL_009640 thiamine-phosphate pyrophosphorylase. | PFAM: protein of unknown function DUF583; KEGG: pla:Plav_3273 hypothetical protein. | 0.481 |
Rvan_0872 | Rvan_0075 | PFAM: phosphopantetheine-binding; KEGG: rru:Rru_A0044 acyl carrier protein. | KEGG: pla:Plav_3269 hypothetical protein. | 0.512 |
Rvan_0872 | Rvan_0077 | PFAM: phosphopantetheine-binding; KEGG: rru:Rru_A0044 acyl carrier protein. | PFAM: protein of unknown function DUF583; KEGG: pla:Plav_3273 hypothetical protein. | 0.446 |
Rvan_0872 | Rvan_1306 | PFAM: phosphopantetheine-binding; KEGG: rru:Rru_A0044 acyl carrier protein. | KEGG: pla:Plav_3330 hypothetical protein. | 0.540 |
Rvan_1306 | Rvan_0075 | KEGG: pla:Plav_3330 hypothetical protein. | KEGG: pla:Plav_3269 hypothetical protein. | 0.704 |
Rvan_1306 | Rvan_0077 | KEGG: pla:Plav_3330 hypothetical protein. | PFAM: protein of unknown function DUF583; KEGG: pla:Plav_3273 hypothetical protein. | 0.476 |
Rvan_1306 | Rvan_0872 | KEGG: pla:Plav_3330 hypothetical protein. | PFAM: phosphopantetheine-binding; KEGG: rru:Rru_A0044 acyl carrier protein. | 0.540 |