Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Rvan_0096PFAM: MaoC domain protein dehydratase; KEGG: mno:Mnod_3627 MaoC domain protein dehydratase. (349 aa)    
Predicted Functional Partners:
Rvan_2966
PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: pla:Plav_1613 acyl-CoA dehydrogenase domain-containing protein.
 
 0.986
Rvan_1682
PFAM: HpcH/HpaI aldolase; KEGG: xau:Xaut_3870 HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.983
Rvan_2964
KEGG: mno:Mnod_0039 crotonyl-CoA reductase; TIGRFAM: crotonyl-CoA reductase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein.
 
 
 0.882
Rvan_1142
TIGRFAM: methylmalonyl-CoA mutase, large subunit; KEGG: azc:AZC_0992 methylmalonyl-CoA mutase; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein.
 
  
 0.793
Rvan_2180
KEGG: xau:Xaut_1974 citryl-CoA lyase; PFAM: HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.680
Rvan_0098
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: rpe:RPE_0925 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
    0.679
Rvan_0097
KEGG: rpd:RPD_1279 molybdopterin converting factor, subunit 1; TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein.
       0.658
Rvan_0122
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
 0.645
Rvan_0297
Catalase; KEGG: rru:Rru_A2489 catalase; PFAM: Catalase related subgroup; Catalase domain protein.
   
 0.645
Rvan_0558
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; KEGG: rce:RC1_1743 fatty acid oxidation complex alpha subunit.
  
 0.597
Your Current Organism:
Rhodomicrobium vannielii
NCBI taxonomy Id: 648757
Other names: R. vannielii ATCC 17100, Rhodomicrobium vannielii ATCC 17100, Rhodomicrobium vannielii NCIMB 10020, Rhodomicrobium vannielii str. ATCC 17100, Rhodomicrobium vannielii strain ATCC 17100
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.