Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rvan_0176KEGG: met:M446_3098 Sel1 domain-containing protein; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein. (725 aa)    
Predicted Functional Partners:
Rvan_1249
PFAM: Peptidoglycan-binding domain 1 protein; Sel1 domain protein repeat-containing protein; KEGG: geo:Geob_0947 Sel1 domain protein repeat-containing protein.
  
     0.774
Rvan_0634
PFAM: Sel1 domain protein repeat-containing protein; KEGG: azc:AZC_2814 putative exopolysaccharide regulatory protein.
  
     0.752
Rvan_2533
KEGG: msl:Msil_0025 flagellar basal body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
   
 
 0.704
Rvan_0174
PFAM: hypothetical protein; KEGG: pde:Pden_2733 hypothetical protein.
       0.635
Rvan_0175
PFAM: protein of unknown function DUF81; KEGG: oan:Oant_4039 hypothetical protein.
       0.541
Rvan_2855
Hypothetical protein; KEGG: ana:all0192 serine/threonine kinase.
    
 0.495
Rvan_0447
KEGG: rpe:RPE_1474 hypothetical protein.
 
 
 
 0.438
Rvan_0008
TIGRFAM: CbbX protein; PFAM: AAA ATPase central domain protein; KEGG: rsp:RSP_1280 CbbX protein; SMART: AAA ATPase.
   
 0.424
Rvan_0635
AAA ATPase central domain protein; KEGG: scl:sce5713 cell division cycle protein 48-related protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; Belongs to the AAA ATPase family.
   
 0.424
Your Current Organism:
Rhodomicrobium vannielii
NCBI taxonomy Id: 648757
Other names: R. vannielii ATCC 17100, Rhodomicrobium vannielii ATCC 17100, Rhodomicrobium vannielii NCIMB 10020, Rhodomicrobium vannielii str. ATCC 17100, Rhodomicrobium vannielii strain ATCC 17100
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