Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
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[Homology]
Score
Rvan_0283KEGG: bcv:Bcav_1654 ROK family protein. (166 aa)    
Predicted Functional Partners:
Rvan_0284
SMART: helix-turn-helix domain protein; KEGG: mes:Meso_2258 XRE family transcriptional regulator.
       0.469
Rvan_0285
PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: bja:blr6339 hydrogenase 4 subunit B.
       0.469
Rvan_0286
KEGG: bid:Bind_2475 NADH dehydrogenase.
       0.469
Rvan_0287
KEGG: xau:Xaut_0168 putative hydrogenase-4 component E.
       0.469
Rvan_0288
PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rpe:RPE_0955 hydrogenase 4 subunit F.
       0.469
Rvan_0289
PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: xau:Xaut_0170 NADH-ubiquinone oxidoreductase chain 49kDa.
       0.469
Rvan_0290
PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: bja:blr6344 hydrogenase-3 subunit G.
       0.469
Rvan_0291
PFAM: SirA-like domain-containing protein; KEGG: sil:SPO1895 SirA family protein; Belongs to the sulfur carrier protein TusA family.
       0.469
Your Current Organism:
Rhodomicrobium vannielii
NCBI taxonomy Id: 648757
Other names: R. vannielii ATCC 17100, Rhodomicrobium vannielii ATCC 17100, Rhodomicrobium vannielii NCIMB 10020, Rhodomicrobium vannielii str. ATCC 17100, Rhodomicrobium vannielii strain ATCC 17100
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