STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rvan_0291PFAM: SirA-like domain-containing protein; KEGG: sil:SPO1895 SirA family protein; Belongs to the sulfur carrier protein TusA family. (78 aa)    
Predicted Functional Partners:
Rvan_1993
Cysteine desulfurase NifS; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine.
   
 0.977
Rvan_2874
Cysteine desulfurase; KEGG: smd:Smed_1469 aminotransferase class V; PFAM: aminotransferase class V.
   
 0.977
Rvan_0598
KEGG: tgr:Tgr7_2187 sulfur relay protein TusD/DsrE; TIGRFAM: sulfur relay protein TusD/DsrE; PFAM: DsrE family protein.
  
 
 0.969
Rvan_0606
PFAM: SirA-like domain-containing protein; KEGG: alv:Alvin_2600 SirA family protein; Belongs to the sulfur carrier protein TusA family.
  
  
 
0.913
Rvan_0284
SMART: helix-turn-helix domain protein; KEGG: mes:Meso_2258 XRE family transcriptional regulator.
       0.773
Rvan_0285
PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: bja:blr6339 hydrogenase 4 subunit B.
       0.773
Rvan_0286
KEGG: bid:Bind_2475 NADH dehydrogenase.
       0.773
Rvan_0287
KEGG: xau:Xaut_0168 putative hydrogenase-4 component E.
       0.773
Rvan_0288
PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rpe:RPE_0955 hydrogenase 4 subunit F.
       0.773
Rvan_0289
PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: xau:Xaut_0170 NADH-ubiquinone oxidoreductase chain 49kDa.
       0.773
Your Current Organism:
Rhodomicrobium vannielii
NCBI taxonomy Id: 648757
Other names: R. vannielii ATCC 17100, Rhodomicrobium vannielii ATCC 17100, Rhodomicrobium vannielii NCIMB 10020, Rhodomicrobium vannielii str. ATCC 17100, Rhodomicrobium vannielii strain ATCC 17100
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