Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ssuBABC transporter related protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. (264 aa)    
Predicted Functional Partners:
Rvan_0382
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_3161 putative alkanesulfonate transport system permease protein.
 0.995
Rvan_2074
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xau:Xaut_1210 binding-protein-dependent transport systems inner membrane component.
 0.981
Rvan_0380
KEGG: ppg:PputGB1_1966 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3.
 
 0.975
Rvan_3551
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsq:Rsph17025_0750 binding-protein-dependent transport systems inner membrane component.
 0.972
Rvan_3599
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xau:Xaut_3459 binding-protein-dependent transport systems inner membrane component.
 
 0.972
Rvan_3552
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsq:Rsph17025_0749 binding-protein-dependent transport systems inner membrane component.
 
 0.968
Rvan_3584
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: msl:Msil_2672 binding-protein-dependent transport systems inner membrane component.
 
 0.962
Rvan_3573
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpt:Bpet0411 ABC transporter permease protein.
 
 0.959
Rvan_0329
PFAM: NADPH-dependent FMN reductase; KEGG: azl:AZL_b05570 FMN reductase.
 
 
 0.945
Rvan_2075
KEGG: xau:Xaut_1211 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3.
 
 0.907
Your Current Organism:
Rhodomicrobium vannielii
NCBI taxonomy Id: 648757
Other names: R. vannielii ATCC 17100, Rhodomicrobium vannielii ATCC 17100, Rhodomicrobium vannielii NCIMB 10020, Rhodomicrobium vannielii str. ATCC 17100, Rhodomicrobium vannielii strain ATCC 17100
Server load: low (22%) [HD]