Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rvan_0417PFAM: glycosyl transferase family 2; KEGG: glycosyl transferase family 2. (383 aa)    
Predicted Functional Partners:
Rvan_0418
PFAM: polysaccharide biosynthesis protein; KEGG: tel:tlr1345 hypothetical protein.
 
  
 0.881
Rvan_0420
Glutamine--scyllo-inositol transaminase; KEGG: tel:tlr1344 putative aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
   
 0.854
Rvan_0414
KEGG: tel:tlr0243 hypothetical protein.
 
     0.832
Rvan_0415
PFAM: glycosyl transferase group 1; KEGG: tel:tlr0242 putative glycosyltransferase.
 
     0.818
Rvan_0416
PFAM: glycosyl transferase family 2; KEGG: tel:tlr1346 hypothetical protein.
 
   
0.817
Rvan_0413
TIGRFAM: asparagine synthase (glutamine-hydrolyzing); KEGG: tel:tll0236 asparagine synthetase; PFAM: asparagine synthase; glutamine amidotransferase class-II.
  
    0.782
Rvan_0419
Acetyltransferase; KEGG: rfr:Rfer_0688 acetyltransferase.
       0.777
Rvan_0423
PFAM: WxcM-like domain-containing protein; transferase hexapeptide repeat containing protein; KEGG: rfr:Rfer_0690 WxcM-like.
 
     0.775
Rvan_0841
PFAM: glycosyl transferase family 2; KEGG: rce:RC1_3994 glycosyl transferase, group 2 family protein.
 
   
 0.759
Rvan_0422
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: tel:tlr1344 putative aminotransferase.
 
   
 0.702
Your Current Organism:
Rhodomicrobium vannielii
NCBI taxonomy Id: 648757
Other names: R. vannielii ATCC 17100, Rhodomicrobium vannielii ATCC 17100, Rhodomicrobium vannielii NCIMB 10020, Rhodomicrobium vannielii str. ATCC 17100, Rhodomicrobium vannielii strain ATCC 17100
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