Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
Rvan_0508KEGG: cre:CHLREDRAFT_153969 hypothetical protein. (81 aa)    
Predicted Functional Partners:
Rvan_0505
PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: rpa:RPA1371 putative vanadium nitrogenase protein.
       0.572
Rvan_0506
TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; KEGG: rpa:RPA1372 putative nitrogenase cofactor synthesis protein; PFAM: oxidoreductase/nitrogenase component 1.
       0.572
Rvan_0507
TIGRFAM: nitrogenase MoFe cofactor biosynthesis protein NifE; KEGG: rpa:RPA1373 putative nitrogenase cofactor synthesis protein; PFAM: oxidoreductase/nitrogenase component 1; Belongs to the NifD/NifK/NifE/NifN family.
       0.572
Rvan_0509
Transcriptional regulator, NifA subfamily, Fis Family; KEGG: rpa:RPA1374 sigma-54 dependent, vanadium nitrogenase transcriptional regulator, VnfA; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: GAF domain protein; AAA ATPase.
       0.414
Rvan_0510
KEGG: rpa:RPA1375 hypothetical protein.
       0.414
Your Current Organism:
Rhodomicrobium vannielii
NCBI taxonomy Id: 648757
Other names: R. vannielii ATCC 17100, Rhodomicrobium vannielii ATCC 17100, Rhodomicrobium vannielii NCIMB 10020, Rhodomicrobium vannielii str. ATCC 17100, Rhodomicrobium vannielii strain ATCC 17100
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