Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Rvan_0514KEGG: rpa:RPA1378 nitrogenase vanadium-iron protein alpha chain; TIGRFAM: nitrogenase vanadium-iron protein, alpha chain; nitrogenase alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase component 1; Belongs to the NifD/NifK/NifE/NifN family. (472 aa)    
Predicted Functional Partners:
Rvan_0515
TIGRFAM: V-containing nitrogenase, delta subunit; KEGG: rpa:RPA1379 vanadium dinitrogenase delta subunit; PFAM: Vanadium/alternative nitrogenase delta subunit.
  
 0.995
Rvan_0516
Nitrogenase; KEGG: rpa:RPA1380 nitrogenase vanadium-iron protein, VnfK subunit; PFAM: oxidoreductase/nitrogenase component 1; Belongs to the NifD/NifK/NifE/NifN family.
 
0.995
Rvan_1955
Nitrogenase molybdenum-iron protein beta chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
 
 
 0.952
nifH-2
Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 
 
 0.926
Rvan_0506
TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; KEGG: rpa:RPA1372 putative nitrogenase cofactor synthesis protein; PFAM: oxidoreductase/nitrogenase component 1.
  
 0.924
Rvan_1957
TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; KEGG: mca:MCA0234 nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; PFAM: oxidoreductase/nitrogenase component 1; Belongs to the NifD/NifK/NifE/NifN family.
  
 0.921
Rvan_0546
KEGG: ara:Arad_2372 glutamine synthetase protein; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp.
   
 
 0.914
Rvan_2157
PFAM: glutamine synthetase catalytic region; KEGG: mva:Mvan_1603 glutamate--ammonia ligase.
   
 
 0.914
Rvan_3360
KEGG: rpe:RPE_3881 nitrogenase; TIGRFAM: Fe-only nitrogenase, beta subunit; PFAM: oxidoreductase/nitrogenase component 1; Belongs to the NifD/NifK/NifE/NifN family.
 
 
0.903
Rvan_3588
Radical SAM domain protein; KEGG: rpa:RPA2634 putative nitrogenase iron-molybdenum cofactor biosynthesis protein NifB; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
 
  
 0.901
Your Current Organism:
Rhodomicrobium vannielii
NCBI taxonomy Id: 648757
Other names: R. vannielii ATCC 17100, Rhodomicrobium vannielii ATCC 17100, Rhodomicrobium vannielii NCIMB 10020, Rhodomicrobium vannielii str. ATCC 17100, Rhodomicrobium vannielii strain ATCC 17100
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.