Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Rvan_0697PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: rce:RC1_3164 indolepyruvate ferredoxin oxidoreductase. (1150 aa)    
Predicted Functional Partners:
Rvan_0592
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mag:amb3375 putative glutamate synthase (NADPH) small subunit.
  
 
 0.958
Rvan_0726
KEGG: oca:OCAR_7084 hypothetical protein.
  
 
 0.952
Rvan_3681
TIGRFAM: NADH-quinone oxidoreductase, E subunit; KEGG: azc:AZC_1671 NADH dehydrogenase; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit.
   
 
 0.927
Rvan_0147
4Fe-4S ferredoxin, iron-sulfur binding protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
  
 
 0.922
Rvan_1643
KEGG: bid:Bind_3032 glutamate synthase subunit beta; TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
   
 
 0.878
Rvan_3652
KEGG: alv:Alvin_1082 precorrin 3B synthase CobZ; TIGRFAM: precorrin 3B synthase CobZ; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
 
 0.779
Rvan_0093
TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; KEGG: mno:Mnod_7244 succinate dehydrogenase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
 
 0.743
Rvan_3006
KEGG: msl:Msil_1725 fumarate reductase flavoprotein subunit; TIGRFAM: fumarate reductase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein.
  
 
 0.743
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
   
 
 0.738
Rvan_0698
PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: mno:Mnod_0289 acyl-CoA dehydrogenase domain protein.
 
  
 0.716
Your Current Organism:
Rhodomicrobium vannielii
NCBI taxonomy Id: 648757
Other names: R. vannielii ATCC 17100, Rhodomicrobium vannielii ATCC 17100, Rhodomicrobium vannielii NCIMB 10020, Rhodomicrobium vannielii str. ATCC 17100, Rhodomicrobium vannielii strain ATCC 17100
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.