Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Rvan_0721PFAM: metallophosphoesterase; KEGG: mpo:Mpop_4935 metallophosphoesterase. (265 aa)    
Predicted Functional Partners:
Rvan_0722
KEGG: rce:RC1_1351 diacylglycerol kinase catalytic domain protein, putative; PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region.
 
     0.950
Rvan_0720
PFAM: protein of unknown function DUF1328; KEGG: pat:Patl_4137 hypothetical protein.
       0.595
Rvan_0723
KEGG: mrd:Mrad2831_2937 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver.
 
  
 0.576
Rvan_0724
PFAM: protein of unknown function UCP012641; KEGG: azl:AZL_c00190 hypothetical protein.
 
     0.479
Rvan_1163
Putative adenylate/guanylate cyclase; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: rhi:NGR_b01410 probable adenylate class-3/4/guanylyl cyclase; SMART: Tetratricopeptide repeat.
     
 0.422
Your Current Organism:
Rhodomicrobium vannielii
NCBI taxonomy Id: 648757
Other names: R. vannielii ATCC 17100, Rhodomicrobium vannielii ATCC 17100, Rhodomicrobium vannielii NCIMB 10020, Rhodomicrobium vannielii str. ATCC 17100, Rhodomicrobium vannielii strain ATCC 17100
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.