STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rvan_0767KEGG: met:M446_6293 hypothetical protein. (797 aa)    
Predicted Functional Partners:
Rvan_2725
KEGG: alv:Alvin_1358 dolichyl-phosphate beta-D-mannosyltransferase; PFAM: glycosyl transferase family 2; GtrA family protein.
  
  
 0.717
Rvan_3472
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bid:Bind_2970 TonB-dependent receptor.
  
     0.590
Rvan_1949
KEGG: xau:Xaut_0125 hypothetical protein.
  
     0.521
Rvan_0188
PFAM: Protein of unknown function DUF2252; KEGG: msl:Msil_2675 hypothetical protein.
  
     0.499
Rvan_2648
PFAM: transport-associated; KEGG: OmpA/MotB domain protein.
  
     0.497
Rvan_2298
PFAM: Stress-induced protein, KGG, repeat; KEGG: bid:Bind_3101 hypothetical protein.
  
     0.484
Rvan_2574
KEGG: rpd:RPD_1244 hypothetical protein.
  
     0.480
Rvan_2708
KEGG: oan:Oant_4293 hypothetical protein.
  
     0.459
Your Current Organism:
Rhodomicrobium vannielii
NCBI taxonomy Id: 648757
Other names: R. vannielii ATCC 17100, Rhodomicrobium vannielii ATCC 17100, Rhodomicrobium vannielii NCIMB 10020, Rhodomicrobium vannielii str. ATCC 17100, Rhodomicrobium vannielii strain ATCC 17100
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.