STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rvan_0803KEGG: rsh:Rsph17029_0235 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver. (122 aa)    
Predicted Functional Partners:
Rvan_0802
KEGG: mrd:Mrad2831_4815 CheA signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; CheW domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein.
 0.992
Rvan_0800
KEGG: gsu:GSU0683 methyl-accepting chemotaxis protein, putative; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer.
 
 0.979
Rvan_0801
CheW protein; KEGG: azl:AZL_a08730 chemotaxis protein; PFAM: CheW domain protein; SMART: CheW domain protein.
 
 
 0.975
Rvan_2545
KEGG: rpe:RPE_1193 CheA signal transduction histidine kinases; PFAM: ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; CheW domain protein; SMART: CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein.
 0.963
Rvan_0799
KEGG: rru:Rru_A1402 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein.
 
 
 0.937
Rvan_2575
KEGG: mno:Mnod_1691 CheA signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; CheW domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein.
 
 0.931
Rvan_2565
KEGG: bra:BRADO6065 putative response regulator receiver (CheY-like protein); PFAM: response regulator receiver; SMART: response regulator receiver.
 
 
0.926
Rvan_2536
PFAM: surface presentation of antigens (SPOA) protein; KEGG: azc:AZC_0641 FliN protein.
   
 0.914
Rvan_2546
KEGG: rpe:RPE_1192 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver.
  
  
 
0.906
Rvan_0143
PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; response regulator receiver; KEGG: met:M446_1809 PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; response regulator receiver.
 
 
 0.905
Your Current Organism:
Rhodomicrobium vannielii
NCBI taxonomy Id: 648757
Other names: R. vannielii ATCC 17100, Rhodomicrobium vannielii ATCC 17100, Rhodomicrobium vannielii NCIMB 10020, Rhodomicrobium vannielii str. ATCC 17100, Rhodomicrobium vannielii strain ATCC 17100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.