node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Rvan_0944 | Rvan_0945 | Rvan_0944 | Rvan_0945 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.811 |
Rvan_0944 | Rvan_0947 | Rvan_0944 | Rvan_0947 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | PFAM: Colicin V production protein; KEGG: nwi:Nwi_2016 colicin V production protein. | 0.616 |
Rvan_0944 | Rvan_1828 | Rvan_0944 | Rvan_1828 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | PFAM: UvrD/REP helicase; KEGG: nha:Nham_2739 UvrD/REP helicase. | 0.675 |
Rvan_0944 | radA | Rvan_0944 | Rvan_0946 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.868 |
Rvan_0944 | recA | Rvan_0944 | Rvan_3024 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.685 |
Rvan_0945 | Rvan_0944 | Rvan_0945 | Rvan_0944 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | 0.811 |
Rvan_0945 | Rvan_0947 | Rvan_0945 | Rvan_0947 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | PFAM: Colicin V production protein; KEGG: nwi:Nwi_2016 colicin V production protein. | 0.709 |
Rvan_0945 | Rvan_2106 | Rvan_0945 | Rvan_2106 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | 0.485 |
Rvan_0945 | radA | Rvan_0945 | Rvan_0946 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.856 |
Rvan_0947 | Rvan_0944 | Rvan_0947 | Rvan_0944 | PFAM: Colicin V production protein; KEGG: nwi:Nwi_2016 colicin V production protein. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | 0.616 |
Rvan_0947 | Rvan_0945 | Rvan_0947 | Rvan_0945 | PFAM: Colicin V production protein; KEGG: nwi:Nwi_2016 colicin V production protein. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.709 |
Rvan_0947 | radA | Rvan_0947 | Rvan_0946 | PFAM: Colicin V production protein; KEGG: nwi:Nwi_2016 colicin V production protein. | DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.649 |
Rvan_1492 | Rvan_1828 | Rvan_1492 | Rvan_1828 | KEGG: pin:Ping_2563 hypothetical protein. | PFAM: UvrD/REP helicase; KEGG: nha:Nham_2739 UvrD/REP helicase. | 0.900 |
Rvan_1492 | radA | Rvan_1492 | Rvan_0946 | KEGG: pin:Ping_2563 hypothetical protein. | DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.610 |
Rvan_1492 | recA | Rvan_1492 | Rvan_3024 | KEGG: pin:Ping_2563 hypothetical protein. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.843 |
Rvan_1492 | uvrC | Rvan_1492 | Rvan_3495 | KEGG: pin:Ping_2563 hypothetical protein. | Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.578 |
Rvan_1828 | Rvan_0944 | Rvan_1828 | Rvan_0944 | PFAM: UvrD/REP helicase; KEGG: nha:Nham_2739 UvrD/REP helicase. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | 0.675 |
Rvan_1828 | Rvan_1492 | Rvan_1828 | Rvan_1492 | PFAM: UvrD/REP helicase; KEGG: nha:Nham_2739 UvrD/REP helicase. | KEGG: pin:Ping_2563 hypothetical protein. | 0.900 |
Rvan_1828 | Rvan_2106 | Rvan_1828 | Rvan_2106 | PFAM: UvrD/REP helicase; KEGG: nha:Nham_2739 UvrD/REP helicase. | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | 0.431 |
Rvan_1828 | radA | Rvan_1828 | Rvan_0946 | PFAM: UvrD/REP helicase; KEGG: nha:Nham_2739 UvrD/REP helicase. | DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.769 |