STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rvan_1124PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: xau:Xaut_0141 electron transfer flavoprotein alpha/beta-subunit. (369 aa)    
Predicted Functional Partners:
Rvan_1125
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: rec:RHECIAT_PB0000268 electron transfer flavoprotein, beta subunit.
 0.999
Rvan_1602
Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
 
 0.996
Rvan_3504
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: mrd:Mrad2831_2960 electron transfer flavoprotein alpha/beta-subunit.
 0.990
Rvan_1122
Ferredoxin like protein, FixX; Could be a 3Fe-4S cluster-containing protein.
 
 0.987
Rvan_1123
Electron-transferring-flavoprotein dehydrogenase; Part of an electron transfer system. Belongs to the ETF-QO/FixC family.
 
 
 0.953
Rvan_1333
Transketolase central region; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
 
 0.915
Rvan_3409
PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: azo:azo0394 acyl-CoA dehydrogenase.
 
 0.832
Rvan_3412
PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: sil:SPO2211 acyl-CoA dehydrogenase.
 
 0.785
Rvan_3070
PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: rfr:Rfer_2817 acyl-CoA dehydrogenase-like.
 
 0.769
Rvan_0698
PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: mno:Mnod_0289 acyl-CoA dehydrogenase domain protein.
 
 0.750
Your Current Organism:
Rhodomicrobium vannielii
NCBI taxonomy Id: 648757
Other names: R. vannielii ATCC 17100, Rhodomicrobium vannielii ATCC 17100, Rhodomicrobium vannielii NCIMB 10020, Rhodomicrobium vannielii str. ATCC 17100, Rhodomicrobium vannielii strain ATCC 17100
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