Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rvan_1286KEGG: bra:BRADO0114 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. (279 aa)    
Predicted Functional Partners:
Rvan_0877
PFAM: permease YjgP/YjgQ family protein; KEGG: mno:Mnod_5836 permease YjgP/YjgQ family protein.
 
 
 0.989
Rvan_0878
PFAM: permease YjgP/YjgQ family protein; KEGG: mrd:Mrad2831_0555 permease YjgP/YjgQ family protein.
 
 
 0.987
Rvan_1287
PFAM: OstA family protein; KEGG: rpt:Rpal_0049 OstA family protein.
  
  
 0.974
Rvan_1288
PFAM: protein of unknown function DUF1239; KEGG: hypothetical protein.
    
  0.973
Rvan_1183
PFAM: ABC-2 type transporter; KEGG: rpc:RPC_2367 hypothetical protein.
   
  0.934
Rvan_1184
PFAM: ABC-2 type transporter; KEGG: rpc:RPC_2368 hypothetical protein.
      0.901
Rvan_1312
TIGRFAM: KpsF/GutQ family protein; KEGG: azc:AZC_0706 sugar isomerase; PFAM: sugar isomerase (SIS); CBS domain containing protein; Belongs to the SIS family. GutQ/KpsF subfamily.
 
  
 0.868
lpxA
acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
 
  
 0.829
lpxD
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.
 
  
 0.798
Rvan_1354
Sulfate ABC transporter, inner membrane subunit CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
      0.774
Your Current Organism:
Rhodomicrobium vannielii
NCBI taxonomy Id: 648757
Other names: R. vannielii ATCC 17100, Rhodomicrobium vannielii ATCC 17100, Rhodomicrobium vannielii NCIMB 10020, Rhodomicrobium vannielii str. ATCC 17100, Rhodomicrobium vannielii strain ATCC 17100
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