STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rvan_1311KEGG: rpt:Rpal_3836 alpha,alpha-trehalose-phosphate synthase (UDP-forming); PFAM: glycosyl transferase family 20. (775 aa)    
Predicted Functional Partners:
Rvan_3333
Trehalose-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
 
 0.995
Rvan_3331
Alpha,alpha-trehalose-phosphate synthase (UDP-forming); Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-alpha-D- glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose- 6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor; Belongs to the glycosyltransferase 20 family.
  
  
 
0.919
Rvan_1313
TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; KEGG: bid:Bind_0435 UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase.
    
 0.917
Rvan_0835
PFAM: glycosyl transferase group 1; KEGG: mmb:Mmol_1787 glycosyl transferase group 1.
    
 0.902
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
     
 0.826
Rvan_0185
PFAM: NAD-dependent epimerase/dehydratase; KEGG: tmz:Tmz1t_3455 NAD-dependent epimerase/dehydratase.
     
  0.800
Rvan_0401
PFAM: NAD-dependent epimerase/dehydratase; KEGG: mlo:mlr7549 nucleotide sugar epimerase.
     
  0.800
Rvan_0843
Glucose-1-phosphate cytidylyltransferase; KEGG: bov:BOV_A0382 nucleotidyltransferase family protein.
     
  0.800
Rvan_3332
PFAM: glycoside hydrolase 15-related; KEGG: mes:Meso_1528 glycoside hydrolase 15-related.
 
   
 0.788
Rvan_1210
PFAM: glycoside hydrolase 15-related; KEGG: putative glucoamylase or related glycosyl hydrolase protein.
 
   
 0.718
Your Current Organism:
Rhodomicrobium vannielii
NCBI taxonomy Id: 648757
Other names: R. vannielii ATCC 17100, Rhodomicrobium vannielii ATCC 17100, Rhodomicrobium vannielii NCIMB 10020, Rhodomicrobium vannielii str. ATCC 17100, Rhodomicrobium vannielii strain ATCC 17100
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