STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rvan_1370KEGG: mlo:mlr6511 hypothetical protein. (627 aa)    
Predicted Functional Partners:
Rvan_1371
KEGG: oan:Oant_2153 hypothetical protein.
 
     0.674
Rvan_1190
KEGG: bmr:BMI_I667 hypothetical protein.
  
     0.648
nadK
ATP-NAD/AcoX kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
       0.551
Rvan_1575
PFAM: CHAD domain containing protein; KEGG: cwo:Cwoe_1697 CHAD domain containing protein.
  
     0.412
Rvan_3397
KEGG: bid:Bind_0732 hypothetical protein.
  
     0.411
Rvan_1368
PFAM: CutA1 divalent ion tolerance protein; KEGG: met:M446_5355 CutA1 divalent ion tolerance protein.
       0.407
Your Current Organism:
Rhodomicrobium vannielii
NCBI taxonomy Id: 648757
Other names: R. vannielii ATCC 17100, Rhodomicrobium vannielii ATCC 17100, Rhodomicrobium vannielii NCIMB 10020, Rhodomicrobium vannielii str. ATCC 17100, Rhodomicrobium vannielii strain ATCC 17100
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