Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Rvan_1810PFAM: Type II secretion system F domain; KEGG: ppd:Ppro_2512 type II secretion system protein. (396 aa)    
Predicted Functional Partners:
Rvan_1811
PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: gspE; general secretion pathway protein E.
 
 0.999
Rvan_1809
KEGG: xau:Xaut_2109 general secretion pathway protein G; TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G.
 
  
 0.989
Rvan_1814
Hypothetical protein; KEGG: rxy:Rxyl_1463 Tfp pilus assembly protein PilO-like protein.
   
 
 0.952
Rvan_1816
PFAM: type II secretion system protein G; KEGG: gspG2; general secretion pathway protein G.
 
  
 0.941
Rvan_1818
PFAM: type II and III secretion system protein; Secretin/TonB short domain; KEGG: gur:Gura_1929 type II and III secretion system protein; Belongs to the bacterial secretin family.
 
  
 0.834
Rvan_1817
KEGG: gsu:GSU1777 hypothetical protein.
 
  
 0.820
Rvan_1815
KEGG: pca:Pcar_0595 hypothetical protein.
  
  
 0.784
Rvan_1812
Hypothetical protein; KEGG: cre:CHLREDRAFT_205871 transcription factor-like protein.
       0.773
Rvan_1813
PFAM: Fimbrial assembly family protein; KEGG: gsu:GSU1781 hypothetical protein.
       0.773
Rvan_3341
Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
  
    0.657
Your Current Organism:
Rhodomicrobium vannielii
NCBI taxonomy Id: 648757
Other names: R. vannielii ATCC 17100, Rhodomicrobium vannielii ATCC 17100, Rhodomicrobium vannielii NCIMB 10020, Rhodomicrobium vannielii str. ATCC 17100, Rhodomicrobium vannielii strain ATCC 17100
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.