Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
Rvan_1812Hypothetical protein; KEGG: cre:CHLREDRAFT_205871 transcription factor-like protein. (276 aa)    
Predicted Functional Partners:
Rvan_1809
KEGG: xau:Xaut_2109 general secretion pathway protein G; TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G.
       0.773
Rvan_1810
PFAM: Type II secretion system F domain; KEGG: ppd:Ppro_2512 type II secretion system protein.
       0.773
Rvan_1811
PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: gspE; general secretion pathway protein E.
       0.773
Rvan_1813
PFAM: Fimbrial assembly family protein; KEGG: gsu:GSU1781 hypothetical protein.
       0.773
Rvan_1814
Hypothetical protein; KEGG: rxy:Rxyl_1463 Tfp pilus assembly protein PilO-like protein.
       0.773
Rvan_1808
PFAM: peptidase A24A prepilin type IV; KEGG: xau:Xaut_2105 peptidase A24A prepilin type IV.
       0.563
Your Current Organism:
Rhodomicrobium vannielii
NCBI taxonomy Id: 648757
Other names: R. vannielii ATCC 17100, Rhodomicrobium vannielii ATCC 17100, Rhodomicrobium vannielii NCIMB 10020, Rhodomicrobium vannielii str. ATCC 17100, Rhodomicrobium vannielii strain ATCC 17100
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