Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rvan_1819Hypothetical protein; KEGG: afv:AFLA_057220 translation elongation factor G2, putative. (170 aa)    
Predicted Functional Partners:
Rvan_1818
PFAM: type II and III secretion system protein; Secretin/TonB short domain; KEGG: gur:Gura_1929 type II and III secretion system protein; Belongs to the bacterial secretin family.
       0.709
Rvan_1815
KEGG: pca:Pcar_0595 hypothetical protein.
       0.704
Rvan_1816
PFAM: type II secretion system protein G; KEGG: gspG2; general secretion pathway protein G.
       0.704
Rvan_1817
KEGG: gsu:GSU1777 hypothetical protein.
       0.704
Your Current Organism:
Rhodomicrobium vannielii
NCBI taxonomy Id: 648757
Other names: R. vannielii ATCC 17100, Rhodomicrobium vannielii ATCC 17100, Rhodomicrobium vannielii NCIMB 10020, Rhodomicrobium vannielii str. ATCC 17100, Rhodomicrobium vannielii strain ATCC 17100
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