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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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Score
Rvan_1906PFAM: restriction modification system DNA specificity domain; KEGG: cli:Clim_2467 restriction modification system DNA specificity domain. (409 aa)    
Predicted Functional Partners:
Rvan_1907
PFAM: N-6 DNA methylase; KEGG: sme:SMc02296 putative modification enzyme transmembrane protein.
 
 
 0.989
Rvan_1905
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.979
Rvan_2836
KEGG: bid:Bind_2672 N-6 DNA methylase; TIGRFAM: type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase.
 
 
 0.948
Rvan_3143
PFAM: N-6 DNA methylase; KEGG: hsdM3; type I restriction-modification system RcaSBIV subunit M.
 
 0.936
Rvan_2832
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.877
Rvan_1419
PFAM: N-6 DNA methylase; KEGG: rme:Rmet_6243 hypothetical protein.
  
 
 0.808
Rvan_2833
Restriction modification system DNA specificity domain protein; KEGG: ana:all2687 type I restriction-modification enzyme S subunit; manually curated; PFAM: restriction modification system DNA specificity domain.
 
     0.772
Rvan_3141
PFAM: EcoEI R domain protein; type III restriction protein res subunit; protein of unknown function DUF450; KEGG: hsdR3; type I restriction-modification system RcaSBIV subunit R; SMART: DEAD-like helicase.
 
 
 0.719
Rvan_1903
KEGG: nml:Namu_4241 AMP-dependent synthetase and ligase.
       0.492
Rvan_1904
KEGG: hor:Hore_17110 hypothetical protein.
       0.492
Your Current Organism:
Rhodomicrobium vannielii
NCBI taxonomy Id: 648757
Other names: R. vannielii ATCC 17100, Rhodomicrobium vannielii ATCC 17100, Rhodomicrobium vannielii NCIMB 10020, Rhodomicrobium vannielii str. ATCC 17100, Rhodomicrobium vannielii strain ATCC 17100
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