STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rvan_1959Nitrogen fixation protein; KEGG: afr:AFE_1514 hypothetical protein; TIGRFAM: nitrogen fixation protein; PFAM: protein of unknown function DUF269. (154 aa)    
Predicted Functional Partners:
Rvan_1958
Nitrogen fixation protein NifX; KEGG: rpb:RPB_0974 dinitrogenase iron-molybdenum cofactor biosynthesis; TIGRFAM: nitrogen fixation protein NifX; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein.
  
 0.968
Rvan_1956
KEGG: mca:MCA0233 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE; TIGRFAM: nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: oxidoreductase/nitrogenase component 1; BFD domain protein [2Fe-2S]-binding domain protein; Belongs to the NifD/NifK/NifE/NifN family.
 
    0.959
Rvan_1957
TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; KEGG: mca:MCA0234 nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; PFAM: oxidoreductase/nitrogenase component 1; Belongs to the NifD/NifK/NifE/NifN family.
 
    0.954
Rvan_1960
PFAM: protein of unknown function DUF683; KEGG: xau:Xaut_0095 hypothetical protein.
 
  
 0.951
Rvan_1955
Nitrogenase molybdenum-iron protein beta chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
 
    0.921
Rvan_1954
TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; KEGG: msl:Msil_3631 nitrogenase molybdenum-iron protein alpha chain; PFAM: oxidoreductase/nitrogenase component 1.
 
    0.898
Rvan_1961
TIGRFAM: ferredoxin III, nif-specific; KEGG: bbt:BBta_5917 ferredoxin-3 (ferredoxin III) (FdIII).
 
    0.872
Rvan_1962
PFAM: NifQ family protein; KEGG: gdj:Gdia_1561 NifQ family protein.
 
    0.872
nifW
Nitrogen fixation protein NifW; May protect the nitrogenase Fe-Mo protein from oxidative damage; Belongs to the NifW family.
 
  
 0.857
Rvan_3439
PFAM: NifZ family protein; KEGG: azc:AZC_3419 iron-sulfur cofactor synthesis protein.
 
    0.848
Your Current Organism:
Rhodomicrobium vannielii
NCBI taxonomy Id: 648757
Other names: R. vannielii ATCC 17100, Rhodomicrobium vannielii ATCC 17100, Rhodomicrobium vannielii NCIMB 10020, Rhodomicrobium vannielii str. ATCC 17100, Rhodomicrobium vannielii strain ATCC 17100
Server load: medium (66%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.