STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rvan_2201TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: azl:AZL_f01870 mannose-1-phosphate guanylyltransferase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Belongs to the mannose-6-phosphate isomerase type 2 family. (476 aa)    
Predicted Functional Partners:
Rvan_0398
PFAM: sugar transferase; KEGG: cpb:Cphamn1_0384 sugar transferase.
  
  
 0.994
Rvan_0435
PFAM: sugar transferase; KEGG: cpb:Cphamn1_0384 sugar transferase.
  
  
 0.994
Rvan_0840
KEGG: pla:Plav_1925 sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
  
  
 0.994
Rvan_2767
PFAM: sugar transferase; KEGG: gwc:GWCH70_3256 undecaprenyl-phosphate galactose phosphotransferase.
  
  
 0.994
Rvan_2479
PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: pde:Pden_4824 phosphoglucomutase/phosphomannomutase alpha/beta/subunit.
 
 0.980
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
 
 
 0.969
Rvan_3528
PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: pla:Plav_1053 phosphoglucomutase/phosphomannomutase alpha/beta/subunit.
 
 
 0.966
Rvan_0542
PFAM: ROK family protein; KEGG: rce:RC1_0837 ROK family protein.
    
 0.954
Rvan_2195
PFAM: phosphoglucose isomerase (PGI); KEGG: pla:Plav_0292 glucose-6-phosphate isomerase.
  
 
 0.954
fbp
PFAM: Inositol phosphatase/fructose-16-bisphosphatase; KEGG: inositol phosphatase/fructose-16-bisphosphatase; Belongs to the FBPase class 1 family.
   
 0.935
Your Current Organism:
Rhodomicrobium vannielii
NCBI taxonomy Id: 648757
Other names: R. vannielii ATCC 17100, Rhodomicrobium vannielii ATCC 17100, Rhodomicrobium vannielii NCIMB 10020, Rhodomicrobium vannielii str. ATCC 17100, Rhodomicrobium vannielii strain ATCC 17100
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.