Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Rvan_2278TIGRFAM: nucleotide sugar dehydrogenase; KEGG: mmr:Mmar10_2489 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase. (457 aa)    
Predicted Functional Partners:
Rvan_3668
PFAM: NAD-dependent epimerase/dehydratase; KEGG: hya:HY04AAS1_1611 NAD-dependent epimerase/dehydratase.
 0.994
Rvan_3089
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
 
 0.988
Rvan_1313
TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; KEGG: bid:Bind_0435 UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase.
 
 0.982
Rvan_0185
PFAM: NAD-dependent epimerase/dehydratase; KEGG: tmz:Tmz1t_3455 NAD-dependent epimerase/dehydratase.
 0.959
Rvan_0401
PFAM: NAD-dependent epimerase/dehydratase; KEGG: mlo:mlr7549 nucleotide sugar epimerase.
 
 0.955
Rvan_2462
TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
 
 0.949
Rvan_2951
Manually curated; TIGRFAM: UDP-glucose 4-epimerase; KEGG: mei:Msip34_1820 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.943
Rvan_2201
TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: azl:AZL_f01870 mannose-1-phosphate guanylyltransferase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.942
Rvan_3091
KEGG: swi:Swit_4019 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.917
Rvan_0027
PFAM: NAD-dependent epimerase/dehydratase; KEGG: aca:ACP_0749 NAD dependent epimerase/dehydratase family protein.
 
 0.886
Your Current Organism:
Rhodomicrobium vannielii
NCBI taxonomy Id: 648757
Other names: R. vannielii ATCC 17100, Rhodomicrobium vannielii ATCC 17100, Rhodomicrobium vannielii NCIMB 10020, Rhodomicrobium vannielii str. ATCC 17100, Rhodomicrobium vannielii strain ATCC 17100
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.