STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gloBHydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. (267 aa)    
Predicted Functional Partners:
Rvan_0512
Lactoylglutathione lyase; KEGG: rpa:RPA1377 glyoxalase; TIGRFAM: lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase.
 
  
 0.949
Rvan_0772
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: xau:Xaut_4172 glyoxalase/bleomycin resistance protein/dioxygenase.
 
  
 0.939
Rvan_1963
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: npu:Npun_F2517 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding.
  
 0.913
Rvan_0337
PFAM: protein of unknown function DUF985; KEGG: gdj:Gdia_0454 protein of unknown function DUF985.
      0.706
Rvan_2339
PFAM: Methyltransferase type 11; KEGG: pla:Plav_1579 methyltransferase type 11.
     
 0.667
Rvan_2337
KEGG: nha:Nham_2009 DNA polymerase III subunit delta'.
  
   0.648
Rvan_0311
KEGG: mch:Mchl_0014 glutaredoxin-like protein; TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily.
 
  
 0.545
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
     
 0.539
Rvan_0064
PFAM: protein of unknown function DUF882; KEGG: protein of unknown function DUF882.
  
    0.496
Your Current Organism:
Rhodomicrobium vannielii
NCBI taxonomy Id: 648757
Other names: R. vannielii ATCC 17100, Rhodomicrobium vannielii ATCC 17100, Rhodomicrobium vannielii NCIMB 10020, Rhodomicrobium vannielii str. ATCC 17100, Rhodomicrobium vannielii strain ATCC 17100
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