STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rvan_2392Manually curated; PFAM: ATP-binding region ATPase domain protein; KEGG: pla:Plav_0305 integral membrane sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein. (476 aa)    
Predicted Functional Partners:
Rvan_1333
Transketolase central region; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.967
Rvan_2917
Two component transcriptional regulator, winged helix family; KEGG: mlo:mlr4237 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver.
 
 
 0.867
Rvan_0549
KEGG: met:M446_2639 hypothetical protein.
  
     0.709
Rvan_0244
Integral membrane sensor signal transduction histidine kinase; KEGG: azc:AZC_4692 histidine kinase A; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein.
  
     0.708
Rvan_2393
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: pla:Plav_0304 pyridine nucleotide-disulphide oxidoreductase dimerisation region.
   
  0.708
Rvan_2377
Two component transcriptional regulator PhoB, winged helix family; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; KEGG: azc:AZC_4032 phosphate regulon transcriptional regulatory protein; SMART: response regulator receiver.
 
 
 0.704
Rvan_0245
KEGG: azc:AZC_4693 transcriptional regulator; PFAM: response regulator receiver; SMART: response regulator receiver.
 
 
 0.687
Rvan_2546
KEGG: rpe:RPE_1192 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver.
 
 
 0.682
Rvan_2418
PFAM: protein of unknown function DUF1491; KEGG: oca:OCAR_6628 hypothetical protein.
 
     0.629
Rvan_0223
Two component transcriptional regulator, winged helix family; KEGG: rpb:RPB_4173 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver.
 
 
 0.622
Your Current Organism:
Rhodomicrobium vannielii
NCBI taxonomy Id: 648757
Other names: R. vannielii ATCC 17100, Rhodomicrobium vannielii ATCC 17100, Rhodomicrobium vannielii NCIMB 10020, Rhodomicrobium vannielii str. ATCC 17100, Rhodomicrobium vannielii strain ATCC 17100
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