STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rvan_2422TIGRFAM: gamma-glutamyltransferase; KEGG: pde:Pden_0660 gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase. (593 aa)    
Predicted Functional Partners:
Rvan_2328
Glutathione-disulfide reductase; Maintains high levels of reduced glutathione.
     
 0.921
gshB
TIGRFAM: glutathione synthetase; KEGG: mlo:mll4735 glutathione synthetase; PFAM: glutathione synthetase ATP-binding; glutathione synthetase domain protein; Belongs to the prokaryotic GSH synthase family.
    
 0.918
pepA
Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
   
 
 0.913
Rvan_2611
PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: bbt:BBta_7039 leucine aminopeptidase; Belongs to the peptidase M17 family.
     
 0.913
Rvan_0133
KEGG: tmz:Tmz1t_0521 allophanate hydrolase subunit 1; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1.
   
 
  0.912
Rvan_0954
KEGG: aminopeptidase N; TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase.
   
 
 0.912
Rvan_3416
PFAM: Pyridoxal-dependent decarboxylase; KEGG: aha:AHA_3494 group II decarboxylase.
     
 0.912
Rvan_1347
PFAM: Glutathione S-transferase domain; KEGG: pde:Pden_0332 glutathione S-transferase domain-containing protein; Belongs to the GST superfamily.
    
 0.906
Rvan_0524
PFAM: Glutathione S-transferase domain; KEGG: mno:Mnod_5423 glutathione S-transferase domain protein.
     
 0.904
Rvan_0630
PFAM: Glutathione S-transferase domain; KEGG: rso:RSc0992 glutathione S-transferase-like transmembrane protein.
     
 0.904
Your Current Organism:
Rhodomicrobium vannielii
NCBI taxonomy Id: 648757
Other names: R. vannielii ATCC 17100, Rhodomicrobium vannielii ATCC 17100, Rhodomicrobium vannielii NCIMB 10020, Rhodomicrobium vannielii str. ATCC 17100, Rhodomicrobium vannielii strain ATCC 17100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.