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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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experimentally determined
co-expression
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gene co-occurrence
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[Homology]
Score
Rvan_2507KEGG: mlo:mlr3700 two-component response regulator; PFAM: response regulator receiver; Sigma-70 region 4 type 2; SMART: response regulator receiver. (279 aa)    
Predicted Functional Partners:
Rvan_1512
PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; response regulator receiver; KEGG: rpe:RPE_3627 PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; response regulator receiver.
 
 
 0.923
Rvan_0107
Signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; PAS fold-4 domain protein; KEGG: mlo:mlr9681 sensory transduction histidine kinase; SMART: ATP-binding region ATPase domain protein.
 
 
 0.914
Rvan_1686
TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; GAF domain protein; response regulator receiver; KEGG: bra:BRADO6873 two-component sensor histidine kinase; SMART: GAF domain protein; PAC repeat-containing protein; PAS domain containing protein; response regulator receiver.
 
 
 0.905
Rvan_2509
RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: jan:Jann_3565 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; Belongs to the sigma-70 factor family. ECF subfamily.
 
  
 0.886
Rvan_2549
PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; KEGG: met:M446_3213 flagellar motor switch protein FliM.
  
 
 0.874
Rvan_0981
PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; KEGG: PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; histidine kinase A domain protein.
  
 
 0.872
Rvan_0143
PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; response regulator receiver; KEGG: met:M446_1809 PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; response regulator receiver.
  
 
 0.862
Rvan_3673
PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; response regulator receiver; KEGG: bra:BRADO1833 hypothetical protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver.
  
 
 0.862
Rvan_2548
PFAM: flagellar motor switch protein FliG; KEGG: bid:Bind_2807 flagellar motor switch protein FliG.
  
 
 0.845
fliE
PFAM: flagellar hook-basal body complex protein FliE; KEGG: mdi:METDI0599 flagellar hook-basal body complex protein FliE.
  
 
 0.843
Your Current Organism:
Rhodomicrobium vannielii
NCBI taxonomy Id: 648757
Other names: R. vannielii ATCC 17100, Rhodomicrobium vannielii ATCC 17100, Rhodomicrobium vannielii NCIMB 10020, Rhodomicrobium vannielii str. ATCC 17100, Rhodomicrobium vannielii strain ATCC 17100
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