STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fliPFlagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (265 aa)    
Predicted Functional Partners:
Rvan_2554
PFAM: type III secretion system inner membrane R protein; KEGG: rpc:RPC_1119 flagellar biosynthesis protein FliR.
 
 
 0.999
fliQ
Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
 
 
 0.999
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
 
 0.998
Rvan_2535
PFAM: type III secretion exporter; KEGG: bja:bll6877 flagellar biosynthesis protein FlhB.
 
 
 0.997
Rvan_2571
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
 
 0.997
Rvan_2533
KEGG: msl:Msil_0025 flagellar basal body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
 
 
 0.995
Rvan_2536
PFAM: surface presentation of antigens (SPOA) protein; KEGG: azc:AZC_0641 FliN protein.
 
  
 0.992
Rvan_2526
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
  
 0.991
Rvan_2531
KEGG: bid:Bind_3653 flagellar basal body rod protein FlgG; TIGRFAM: flagellar basal-body rod protein FlgG; flagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
 
 
 0.990
fliE
PFAM: flagellar hook-basal body complex protein FliE; KEGG: mdi:METDI0599 flagellar hook-basal body complex protein FliE.
  
 
 0.989
Your Current Organism:
Rhodomicrobium vannielii
NCBI taxonomy Id: 648757
Other names: R. vannielii ATCC 17100, Rhodomicrobium vannielii ATCC 17100, Rhodomicrobium vannielii NCIMB 10020, Rhodomicrobium vannielii str. ATCC 17100, Rhodomicrobium vannielii strain ATCC 17100
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