Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Rvan_2576KEGG: rpd:RPD_3677 CheW-like protein; PFAM: CheW domain protein; SMART: CheW domain protein. (173 aa)    
Predicted Functional Partners:
Rvan_2575
KEGG: mno:Mnod_1691 CheA signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; CheW domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein.
 
 0.997
Rvan_2573
KEGG: rce:RC1_0897 methyl-accepting chemotaxis protein, putative; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache type 2 domain protein; SMART: chemotaxis sensory transducer.
 
 0.989
Rvan_0802
KEGG: mrd:Mrad2831_4815 CheA signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; CheW domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein.
 
 0.982
Rvan_2543
TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: bbt:BBta_2145 methyl-accepting chemotaxis protein; SMART: chemotaxis sensory transducer; PAC repeat-containing protein; PAS domain containing protein.
 
 0.979
Rvan_2545
KEGG: rpe:RPE_1193 CheA signal transduction histidine kinases; PFAM: ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; CheW domain protein; SMART: CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein.
 
 0.976
Rvan_0799
KEGG: rru:Rru_A1402 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein.
  
  
  0.966
Rvan_2539
KEGG: mrd:Mrad2831_4814 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer.
 
 0.963
Rvan_0800
KEGG: gsu:GSU0683 methyl-accepting chemotaxis protein, putative; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer.
 
 0.953
Rvan_0801
CheW protein; KEGG: azl:AZL_a08730 chemotaxis protein; PFAM: CheW domain protein; SMART: CheW domain protein.
  
  
  0.942
Rvan_2760
TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; PAS fold domain protein; KEGG: pag:PLES_01771 aerotaxis transducer Aer2; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein.
 
 0.932
Your Current Organism:
Rhodomicrobium vannielii
NCBI taxonomy Id: 648757
Other names: R. vannielii ATCC 17100, Rhodomicrobium vannielii ATCC 17100, Rhodomicrobium vannielii NCIMB 10020, Rhodomicrobium vannielii str. ATCC 17100, Rhodomicrobium vannielii strain ATCC 17100
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