STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rvan_2607ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit; KEGG: xfm:Xfasm12_1824 putative nitrate transport system ATP-binding protein; PFAM: ABC nitrate/sulphonate/bicarbonate family transporter, ATPase subunit; ABC transporter related; SMART: AAA ATPase. (441 aa)    
Predicted Functional Partners:
Rvan_2606
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ara:Arad_8260 sugar ABC transporter.
 
   
 0.963
Rvan_2885
PFAM: protein of unknown function DUF214; KEGG: hna:Hneap_0780 protein of unknown function DUF214.
 
      0.843
Rvan_2608
ABC transporter related protein; KEGG: vvu:VV1_2101 ABC-type histidine transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase.
 
   
0.774
Rvan_2609
KEGG: extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; Belongs to the bacterial solute-binding protein 3 family.
     
 0.714
Rvan_0116
Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
    
 0.677
Rvan_1222
KEGG: pde:Pden_3013 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
     
0.670
Rvan_3584
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: msl:Msil_2672 binding-protein-dependent transport systems inner membrane component.
 
  
 0.646
Rvan_3599
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xau:Xaut_3459 binding-protein-dependent transport systems inner membrane component.
  
 0.616
Rvan_3573
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpt:Bpet0411 ABC transporter permease protein.
  
 0.604
Rvan_3615
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gur:Gura_3875 binding-protein-dependent transport systems inner membrane component.
  
 0.590
Your Current Organism:
Rhodomicrobium vannielii
NCBI taxonomy Id: 648757
Other names: R. vannielii ATCC 17100, Rhodomicrobium vannielii ATCC 17100, Rhodomicrobium vannielii NCIMB 10020, Rhodomicrobium vannielii str. ATCC 17100, Rhodomicrobium vannielii strain ATCC 17100
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