Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rvan_2673PFAM: transposase IS3/IS911 family protein; KEGG: rpe:RPE_3518 transposase IS3/IS911 family protein. (137 aa)    
Predicted Functional Partners:
Rvan_2672
PFAM: IS66 Orf2 family protein; KEGG: xau:Xaut_5014 IS66 Orf2 family protein.
       0.775
Rvan_2478
PFAM: IS66 Orf2 family protein; KEGG: xau:Xaut_4819 IS66 Orf2 family protein.
  
     0.633
Rvan_2671
KEGG: rlg:Rleg_4905 transposase IS66.
 
     0.599
Rvan_0392
PFAM: IS66 Orf2 family protein; KEGG: xau:Xaut_4819 IS66 Orf2 family protein.
  
     0.522
Rvan_2674
NAD(+) diphosphatase; KEGG: met:M446_1666 NUDIX hydrolase; PFAM: NUDIX hydrolase; NADH pyrophosphatase-like; Zinc ribbon NADH pyrophosphatase.
       0.404
Your Current Organism:
Rhodomicrobium vannielii
NCBI taxonomy Id: 648757
Other names: R. vannielii ATCC 17100, Rhodomicrobium vannielii ATCC 17100, Rhodomicrobium vannielii NCIMB 10020, Rhodomicrobium vannielii str. ATCC 17100, Rhodomicrobium vannielii strain ATCC 17100
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