Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Rvan_0909 | Rvan_0917 | KEGG: met:M446_2502 hypothetical protein. | PFAM: protein of unknown function DUF1150; KEGG: oca:OCAR_4463 hypothetical protein. | 0.774 |
Rvan_0909 | Rvan_0922 | KEGG: met:M446_2502 hypothetical protein. | KEGG: rpc:RPC_4252 hypothetical protein. | 0.776 |
Rvan_0909 | Rvan_1206 | KEGG: met:M446_2502 hypothetical protein. | KEGG: bra:BRADO6669 putative outer-membrane immunogenic protein precursor; putative secreted protein. | 0.749 |
Rvan_0909 | Rvan_1315 | KEGG: met:M446_2502 hypothetical protein. | PFAM: protein of unknown function DUF459; KEGG: msl:Msil_3880 protein of unknown function DUF459. | 0.729 |
Rvan_0909 | Rvan_1371 | KEGG: met:M446_2502 hypothetical protein. | KEGG: oan:Oant_2153 hypothetical protein. | 0.772 |
Rvan_0909 | Rvan_1672 | KEGG: met:M446_2502 hypothetical protein. | KEGG: rpt:Rpal_2206 hypothetical protein. | 0.751 |
Rvan_0909 | Rvan_2348 | KEGG: met:M446_2502 hypothetical protein. | KEGG: nwi:Nwi_1148 hypothetical protein. | 0.655 |
Rvan_0909 | Rvan_2722 | KEGG: met:M446_2502 hypothetical protein. | PFAM: protein of unknown function DUF992; KEGG: oca:OCAR_7171 hypothetical protein. | 0.585 |
Rvan_0909 | Rvan_2888 | KEGG: met:M446_2502 hypothetical protein. | KEGG: bja:bll4354 hypothetical protein. | 0.679 |
Rvan_0909 | Rvan_3523 | KEGG: met:M446_2502 hypothetical protein. | PFAM: Conserved hypothetical protein CHP02301; KEGG: rpt:Rpal_1260 hypothetical protein. | 0.768 |
Rvan_0917 | Rvan_0909 | PFAM: protein of unknown function DUF1150; KEGG: oca:OCAR_4463 hypothetical protein. | KEGG: met:M446_2502 hypothetical protein. | 0.774 |
Rvan_0917 | Rvan_0922 | PFAM: protein of unknown function DUF1150; KEGG: oca:OCAR_4463 hypothetical protein. | KEGG: rpc:RPC_4252 hypothetical protein. | 0.774 |
Rvan_0917 | Rvan_1206 | PFAM: protein of unknown function DUF1150; KEGG: oca:OCAR_4463 hypothetical protein. | KEGG: bra:BRADO6669 putative outer-membrane immunogenic protein precursor; putative secreted protein. | 0.764 |
Rvan_0917 | Rvan_1315 | PFAM: protein of unknown function DUF1150; KEGG: oca:OCAR_4463 hypothetical protein. | PFAM: protein of unknown function DUF459; KEGG: msl:Msil_3880 protein of unknown function DUF459. | 0.747 |
Rvan_0917 | Rvan_1371 | PFAM: protein of unknown function DUF1150; KEGG: oca:OCAR_4463 hypothetical protein. | KEGG: oan:Oant_2153 hypothetical protein. | 0.775 |
Rvan_0917 | Rvan_1672 | PFAM: protein of unknown function DUF1150; KEGG: oca:OCAR_4463 hypothetical protein. | KEGG: rpt:Rpal_2206 hypothetical protein. | 0.758 |
Rvan_0917 | Rvan_2348 | PFAM: protein of unknown function DUF1150; KEGG: oca:OCAR_4463 hypothetical protein. | KEGG: nwi:Nwi_1148 hypothetical protein. | 0.590 |
Rvan_0917 | Rvan_2722 | PFAM: protein of unknown function DUF1150; KEGG: oca:OCAR_4463 hypothetical protein. | PFAM: protein of unknown function DUF992; KEGG: oca:OCAR_7171 hypothetical protein. | 0.637 |
Rvan_0917 | Rvan_2888 | PFAM: protein of unknown function DUF1150; KEGG: oca:OCAR_4463 hypothetical protein. | KEGG: bja:bll4354 hypothetical protein. | 0.729 |
Rvan_0917 | Rvan_3523 | PFAM: protein of unknown function DUF1150; KEGG: oca:OCAR_4463 hypothetical protein. | PFAM: Conserved hypothetical protein CHP02301; KEGG: rpt:Rpal_1260 hypothetical protein. | 0.768 |
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