STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rvan_2893PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: mch:Mchl_4204 oxidoreductase FAD/NAD(P)-binding domain protein. (257 aa)    
Predicted Functional Partners:
Rvan_1602
Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
 
   
 0.520
Rvan_2890
PFAM: LemA family protein; KEGG: mes:Meso_3226 hypothetical protein.
  
    0.504
Rvan_2891
PFAM: protein of unknown function DUF477; KEGG: sjp:SJA_C1-10380 hypothetical protein.
       0.490
Rvan_2892
PFAM: protein of unknown function DUF477; KEGG: abo:ABO_1880 hypothetical protein.
       0.487
Rvan_2894
PFAM: extracellular solute-binding protein family 5; KEGG: bbt:BBta_7055 oligopeptide ABC transporter periplasmic substrate-binding protein.
       0.486
Rvan_2895
PFAM: extracellular solute-binding protein family 5; KEGG: pla:Plav_0248 extracellular solute-binding protein.
       0.486
Rvan_0697
PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: rce:RC1_3164 indolepyruvate ferredoxin oxidoreductase.
     
 0.478
Rvan_0592
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mag:amb3375 putative glutamate synthase (NADPH) small subunit.
     
 0.442
Rvan_1188
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.439
Rvan_0258
PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase; KEGG: mlo:mlr5329 malic enzyme.
      
 0.428
Your Current Organism:
Rhodomicrobium vannielii
NCBI taxonomy Id: 648757
Other names: R. vannielii ATCC 17100, Rhodomicrobium vannielii ATCC 17100, Rhodomicrobium vannielii NCIMB 10020, Rhodomicrobium vannielii str. ATCC 17100, Rhodomicrobium vannielii strain ATCC 17100
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