STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rvan_2924Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. (293 aa)    
Predicted Functional Partners:
Rvan_2925
KEGG: pla:Plav_1530 Cbb3-type cytochrome oxidase component.
  
 0.999
Rvan_2926
KEGG: rpc:RPC_0014 cytochrome c oxidase, cbb3-type, subunit II; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO.
 
 0.999
Rvan_2927
TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; KEGG: mmr:Mmar10_1149 cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
 
 0.999
Rvan_2923
TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: pla:Plav_1528 cytochrome c oxidase cbb3 type accessory protein FixG.
  
 0.998
Rvan_2922
PFAM: FixH family protein; KEGG: pzu:PHZ_c2809 ferredoxin.
 
 
 0.994
Rvan_1294
Cytochrome b/b6 domain protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.920
Rvan_0756
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.906
Rvan_1295
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.906
Rvan_2920
KEGG: mlo:msr6418 nitrogen fixation protein FixS; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type.
 
  
 0.900
Rvan_1290
Gluconate 2-dehydrogenase (acceptor); KEGG: mea:Mex_1p5282 putative cytochrome c, putative exported protein; PFAM: cytochrome c class I.
 
      0.895
Your Current Organism:
Rhodomicrobium vannielii
NCBI taxonomy Id: 648757
Other names: R. vannielii ATCC 17100, Rhodomicrobium vannielii ATCC 17100, Rhodomicrobium vannielii NCIMB 10020, Rhodomicrobium vannielii str. ATCC 17100, Rhodomicrobium vannielii strain ATCC 17100
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