node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Rvan_1644 | Rvan_2002 | Rvan_1644 | Rvan_2002 | KEGG: xau:Xaut_0477 glutamate synthase (ferredoxin); PFAM: glutamine amidotransferase class-II; glutamate synthase; ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein. | TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; KEGG: bbt:BBta_4510 putative zinc metalloprotease; SMART: PDZ/DHR/GLGF domain protein. | 0.646 |
Rvan_1644 | Rvan_3101 | Rvan_1644 | Rvan_3101 | KEGG: xau:Xaut_0477 glutamate synthase (ferredoxin); PFAM: glutamine amidotransferase class-II; glutamate synthase; ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein. | TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rpe:RPE_1939 protease Do; SMART: PDZ/DHR/GLGF domain protein; Belongs to the peptidase S1C family. | 0.469 |
Rvan_1644 | glnE | Rvan_1644 | Rvan_3104 | KEGG: xau:Xaut_0477 glutamate synthase (ferredoxin); PFAM: glutamine amidotransferase class-II; glutamate synthase; ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein. | (Glutamate--ammonia-ligase) adenylyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal tra [...] | 0.590 |
Rvan_2002 | Rvan_1644 | Rvan_2002 | Rvan_1644 | TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; KEGG: bbt:BBta_4510 putative zinc metalloprotease; SMART: PDZ/DHR/GLGF domain protein. | KEGG: xau:Xaut_0477 glutamate synthase (ferredoxin); PFAM: glutamine amidotransferase class-II; glutamate synthase; ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein. | 0.646 |
Rvan_2002 | Rvan_3101 | Rvan_2002 | Rvan_3101 | TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; KEGG: bbt:BBta_4510 putative zinc metalloprotease; SMART: PDZ/DHR/GLGF domain protein. | TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rpe:RPE_1939 protease Do; SMART: PDZ/DHR/GLGF domain protein; Belongs to the peptidase S1C family. | 0.450 |
Rvan_3101 | Rvan_1644 | Rvan_3101 | Rvan_1644 | TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rpe:RPE_1939 protease Do; SMART: PDZ/DHR/GLGF domain protein; Belongs to the peptidase S1C family. | KEGG: xau:Xaut_0477 glutamate synthase (ferredoxin); PFAM: glutamine amidotransferase class-II; glutamate synthase; ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein. | 0.469 |
Rvan_3101 | Rvan_2002 | Rvan_3101 | Rvan_2002 | TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rpe:RPE_1939 protease Do; SMART: PDZ/DHR/GLGF domain protein; Belongs to the peptidase S1C family. | TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; KEGG: bbt:BBta_4510 putative zinc metalloprotease; SMART: PDZ/DHR/GLGF domain protein. | 0.450 |
Rvan_3101 | Rvan_3102 | Rvan_3101 | Rvan_3102 | TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rpe:RPE_1939 protease Do; SMART: PDZ/DHR/GLGF domain protein; Belongs to the peptidase S1C family. | Two component transcriptional regulator, winged helix family; KEGG: oca:OCAR_6571 transcriptional activator protein CopR; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver. | 0.617 |
Rvan_3101 | Rvan_3103 | Rvan_3101 | Rvan_3103 | TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rpe:RPE_1939 protease Do; SMART: PDZ/DHR/GLGF domain protein; Belongs to the peptidase S1C family. | KEGG: msl:Msil_0190 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein. | 0.663 |
Rvan_3101 | glnE | Rvan_3101 | Rvan_3104 | TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rpe:RPE_1939 protease Do; SMART: PDZ/DHR/GLGF domain protein; Belongs to the peptidase S1C family. | (Glutamate--ammonia-ligase) adenylyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal tra [...] | 0.535 |
Rvan_3101 | leuS | Rvan_3101 | Rvan_2864 | TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rpe:RPE_1939 protease Do; SMART: PDZ/DHR/GLGF domain protein; Belongs to the peptidase S1C family. | KEGG: pla:Plav_1280 leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.476 |
Rvan_3101 | rplI | Rvan_3101 | Rvan_0940 | TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rpe:RPE_1939 protease Do; SMART: PDZ/DHR/GLGF domain protein; Belongs to the peptidase S1C family. | Ribosomal protein L9; Binds to the 23S rRNA. | 0.467 |
Rvan_3101 | rplY | Rvan_3101 | Rvan_1715 | TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rpe:RPE_1939 protease Do; SMART: PDZ/DHR/GLGF domain protein; Belongs to the peptidase S1C family. | Ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | 0.560 |
Rvan_3101 | rpsQ | Rvan_3101 | Rvan_2989 | TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rpe:RPE_1939 protease Do; SMART: PDZ/DHR/GLGF domain protein; Belongs to the peptidase S1C family. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.422 |
Rvan_3101 | rsfS | Rvan_3101 | Rvan_3052 | TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rpe:RPE_1939 protease Do; SMART: PDZ/DHR/GLGF domain protein; Belongs to the peptidase S1C family. | Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.465 |
Rvan_3102 | Rvan_3101 | Rvan_3102 | Rvan_3101 | Two component transcriptional regulator, winged helix family; KEGG: oca:OCAR_6571 transcriptional activator protein CopR; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver. | TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rpe:RPE_1939 protease Do; SMART: PDZ/DHR/GLGF domain protein; Belongs to the peptidase S1C family. | 0.617 |
Rvan_3102 | Rvan_3103 | Rvan_3102 | Rvan_3103 | Two component transcriptional regulator, winged helix family; KEGG: oca:OCAR_6571 transcriptional activator protein CopR; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver. | KEGG: msl:Msil_0190 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein. | 0.977 |
Rvan_3102 | glnE | Rvan_3102 | Rvan_3104 | Two component transcriptional regulator, winged helix family; KEGG: oca:OCAR_6571 transcriptional activator protein CopR; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver. | (Glutamate--ammonia-ligase) adenylyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal tra [...] | 0.830 |
Rvan_3103 | Rvan_3101 | Rvan_3103 | Rvan_3101 | KEGG: msl:Msil_0190 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein. | TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rpe:RPE_1939 protease Do; SMART: PDZ/DHR/GLGF domain protein; Belongs to the peptidase S1C family. | 0.663 |
Rvan_3103 | Rvan_3102 | Rvan_3103 | Rvan_3102 | KEGG: msl:Msil_0190 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein. | Two component transcriptional regulator, winged helix family; KEGG: oca:OCAR_6571 transcriptional activator protein CopR; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver. | 0.977 |