Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rvan_3409PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: azo:azo0394 acyl-CoA dehydrogenase. (378 aa)    
Predicted Functional Partners:
Rvan_0849
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; KEGG: dar:Daro_1547 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.988
Rvan_0558
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; KEGG: rce:RC1_1743 fatty acid oxidation complex alpha subunit.
  
 0.987
Rvan_3408
TIGRFAM: acetyl-CoA acetyltransferase; KEGG: tmz:Tmz1t_0732 acetyl-CoA acetyltransferase; PFAM: Thiolase-like; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.987
Rvan_3503
PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: pla:Plav_1607 electron transfer flavoprotein alpha subunit.
 
 0.970
Rvan_3415
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rhi:NGR_c37150 predicted enoyl-CoA hydratase/isomerase family protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.964
Rvan_3411
KEGG: rsp:RSP_2962 methylmalonate-semialdehyde dehydrogenase; TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase.
  
 
  0.959
Rvan_0023
TIGRFAM: acetyl-CoA acetyltransferase; KEGG: azl:AZL_023130 acetyl-CoA C-acetyltransferase; PFAM: Thiolase-like; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.957
Rvan_0557
TIGRFAM: acetyl-CoA acetyltransferase; KEGG: rce:RC1_1744 3-ketoacyl-CoA thiolase; PFAM: Thiolase-like; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.957
Rvan_0850
TIGRFAM: acetyl-CoA acetyltransferase; KEGG: maq:Maqu_2016 acetyl-CoA acetyltransferase; PFAM: Thiolase-like; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.957
Rvan_2264
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pnu:Pnuc_1611 methylmalonyl-CoA decarboxylase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.957
Your Current Organism:
Rhodomicrobium vannielii
NCBI taxonomy Id: 648757
Other names: R. vannielii ATCC 17100, Rhodomicrobium vannielii ATCC 17100, Rhodomicrobium vannielii NCIMB 10020, Rhodomicrobium vannielii str. ATCC 17100, Rhodomicrobium vannielii strain ATCC 17100
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