Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rvan_3530KEGG: oca:OCAR_4230 arsenical-resistance protein; TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter. (365 aa)    
Predicted Functional Partners:
Rvan_3532
KEGG: xau:Xaut_0875 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight.
  
 0.967
Rvan_3531
TIGRFAM: arsenate reductase; KEGG: mes:Meso_4201 arsenate reductase; PFAM: arsenate reductase and related.
    
 0.936
Rvan_3529
Regulatory protein ArsR; KEGG: ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR.
 
  
 0.863
Rvan_3534
Regulatory protein ArsR; KEGG: rpt:Rpal_4079 transcriptional regulator, MarR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR.
 
  
 0.592
Rvan_3538
KEGG: mpo:Mpop_4997 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight.
  
  
 0.560
Rvan_3544
Manually curated; PFAM: Protein-tyrosine phosphatase, low molecular weight; KEGG: msl:Msil_3072 protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight.
  
  
 0.560
Your Current Organism:
Rhodomicrobium vannielii
NCBI taxonomy Id: 648757
Other names: R. vannielii ATCC 17100, Rhodomicrobium vannielii ATCC 17100, Rhodomicrobium vannielii NCIMB 10020, Rhodomicrobium vannielii str. ATCC 17100, Rhodomicrobium vannielii strain ATCC 17100
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