Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rvan_3552PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsq:Rsph17025_0749 binding-protein-dependent transport systems inner membrane component. (252 aa)    
Predicted Functional Partners:
Rvan_3553
KEGG: rsq:Rsph17025_0748 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.994
Rvan_3600
KEGG: mno:Mnod_4887 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.978
Rvan_3550
KEGG: bbt:BBta_4844 putative ABC transporter (substrate-binding protein).
 
 
 0.973
Rvan_3574
KEGG: met:M446_0056 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.971
Rvan_3585
KEGG: bja:bll6453 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.971
ssuB
ABC transporter related protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 0.968
ssuB-2
ABC transporter related protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 0.966
Rvan_0329
PFAM: NADPH-dependent FMN reductase; KEGG: azl:AZL_b05570 FMN reductase.
  
 
  0.958
Rvan_3617
TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; KEGG: gur:Gura_3874 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein.
 
 
 0.911
Rvan_2075
KEGG: xau:Xaut_1211 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3.
 
 
 0.888
Your Current Organism:
Rhodomicrobium vannielii
NCBI taxonomy Id: 648757
Other names: R. vannielii ATCC 17100, Rhodomicrobium vannielii ATCC 17100, Rhodomicrobium vannielii NCIMB 10020, Rhodomicrobium vannielii str. ATCC 17100, Rhodomicrobium vannielii strain ATCC 17100
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