Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rvan_3591PFAM: oxidoreductase/nitrogenase component 1; KEGG: rpa:RPA2637 nitrogenase iron-molybdenum protein subunit NifK-like protein. (461 aa)    
Predicted Functional Partners:
nifH-3
Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 
 
 0.961
Rvan_3588
Radical SAM domain protein; KEGG: rpa:RPA2634 putative nitrogenase iron-molybdenum cofactor biosynthesis protein NifB; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
 
  
 0.939
Rvan_3587
PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: rpt:Rpal_2599 dinitrogenase iron-molybdenum cofactor biosynthesis protein.
 
 
 0.915
Rvan_0350
PFAM: NAD-glutamate dehydrogenase; KEGG: NAD-glutamate dehydrogenase.
     
 0.900
Rvan_3556
Nitrogenase; KEGG: rsq:Rsph17025_0774 nitrogenase; PFAM: NifH/frxC-family protein; Belongs to the NifH/BchL/ChlL family.
 
 
 0.882
Rvan_3362
TIGRFAM: nitrogenase iron-iron protein, alpha chain; nitrogenase alpha chain; nitrogenase component I, alpha chain; KEGG: cts:Ctha_1831 nitrogenase alpha chain; PFAM: oxidoreductase/nitrogenase component 1.
 
  
 0.879
nifH-2
Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 
 
 0.877
Rvan_3590
PFAM: oxidoreductase/nitrogenase component 1; KEGG: rpt:Rpal_2908 nitrogenase.
 
    
0.821
Rvan_3359
KEGG: rpe:RPE_3880 hypothetical protein; TIGRFAM: Fe-only nitrogenase accessory protein AnfO; PFAM: Nitrogenase iron-iron accessory protein AnfO.
  
   
 0.767
Rvan_3360
KEGG: rpe:RPE_3881 nitrogenase; TIGRFAM: Fe-only nitrogenase, beta subunit; PFAM: oxidoreductase/nitrogenase component 1; Belongs to the NifD/NifK/NifE/NifN family.
 
 
0.745
Your Current Organism:
Rhodomicrobium vannielii
NCBI taxonomy Id: 648757
Other names: R. vannielii ATCC 17100, Rhodomicrobium vannielii ATCC 17100, Rhodomicrobium vannielii NCIMB 10020, Rhodomicrobium vannielii str. ATCC 17100, Rhodomicrobium vannielii strain ATCC 17100
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