STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED51118.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (235 aa)    
Predicted Functional Partners:
SEE75664.1
Hypothetical protein.
 
 0.991
SEE92273.1
Two-component system, OmpR family, sensor histidine kinase SenX3.
  0.902
SEE93345.1
Two-component system, OmpR family, sensor kinase.
 
 0.896
SEE98917.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
 
 0.871
SEE90123.1
Signal transduction histidine kinase.
  
  0.857
SEE10134.1
Signal transduction histidine kinase.
 
 0.820
SEE99556.1
Signal transduction histidine kinase.
 
  0.792
SEE91254.1
TolB amino-terminal domain-containing protein; Manually curated.
     
 0.783
mshD
Mycothiol synthase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol.
      0.736
SEE97900.1
Signal transduction histidine kinase.
 
  0.713
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.